Model Organism miRNA OneArray™ Microarrays

Features

A total of 1480 unique miRNA probes and 26 unique experimental control probes
3 features per probe, for a total of 2,832 features
Contains 100% of Sanger miRBase v11 content for:
- Zebrafish dre (Danio rerio)
- Western clawed frog (Xenopus tropicalis)
- Model nematode (Caenorhabditis elegans)
- Fruit fly (Drosophila melanogaster)
- Puffer fish (Fugu rubripes)
- Dog (Canis familiaris)
- Aurochs (Bos taurus)
- Red Junglefowl/chicken (Gallus gallus)
- Short-tailed gray opossum (Monodelphis domestica)
- Plus 20+ more organisms
1" X 3" (25mm x 75mm) standard-format glass slide
2 arrays per slide
Each probe is spotted onto the array in a highly consistent manner using an innovative non-contact spotting technology adapted and perfected by Phalanx Biotech for microarray manufacturing.

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Ordering Information

Item	Cat. No.	# of Arrays	Acad. Price	Comm. Price
Model Organism miRNA OneArray™ Microarray	MOG_MIRNA	10	$ 990 USD	$ 1490 USD

*miRNA OneArray microarrays must be purchased with a labeling kit. << More>>

OneArray™ Advantages


Figure 1: Post Hybridization of the Human & Primate miRNA OneArray using Cy5, indirect labeling of aRNA.

Probe Set Content

Phalanx Biotech’s Model Organisms I & II miRNA OneArray is designed to contain 100% of miRBase Sequence Database Release 11.0.
Probes contain miRNA-specific sequences and a proprietary spacer designed to enhance the hybridization sensitivity to miRNAs.
Downloadable gene lists, probe sequences, and miRNA GAL files. << More>>

Model Organism I miRNA

Table 1: Model Organisms I miRNA OneArray™ Probe Set Content
Model Organisms I miRNA OneArray	Total Features	Unique Features
Printed Features	2211	720
Control Features	129	26
miRNA Features	2082	694

Table 2: Partial Summary of Model Organisms I miRNA OneArray™ Organism Content
miRBase code	Number of miRNA probes	Organism scientific name	Organism common name(s)
dre	219	Danio rerio	Zebrafish
xtr	166	Xenopus tropicalis	Western clawed frog
cel	154	Caenorhabditis elegans	model nematode
dme	148	Drosophila melanogaster	Fruit fly dme
cbr	93	Caenorhabditis briggsae	model nematode cbr
dse	72	Drosophila sechellia	Fruit fly dse
der	70	Drosophila erecta	Fruit fly der
dya	69	Drosophila yakuba	Fruit fly dya
dpe	67	Drosophila persimilis	Fruit fly dpe
dps	67	Drosophila pseudoobscura	Fruit fly dps
dgr	66	Drosophila grimshawi	Fruit fly dgr
dwi	66	Drosophila willistoni	Fruit fly dwi
dan	65	Drosophila ananassae	Fruit fly dan
dvi	65	Drosophila virilis	Fruit fly dvi
dsi	63	Drosophila simulans	Fruit fly dsi
dmo	62	Drosophila mojavensis	Fruit fly dmo
bmo	25	Bombyx mori	Silk moth
sko	13	Saccoglossus kowalevskii	Acorn worm
cap	12	Capitella sp. I	model polychaete worm
spu	7	Strongylocentrotus purpuratus	Purple sea urchin
xla	7	Xenopus laevis	African Clawed Frog
lmi	4	Locusta migratoria	Migratory locust

Model Organism II miRNA

Table 3: Model Organisms II miRNA OneArray™ Probe Set Content
Model Organisms II miRNA OneArray	Total Features	Unique Features
Printed Features	3165	1038
Control Features	129	26
miRNA Features	3036	1012

Table 4: Partial Summary of Model Organisms II miRNA OneArray™ Organism Content
miRBase code	Number of miRNA probes	Organism scientific name	Organism common name(s)
mml	432	Macaca mulatta	Rhesus Monkey
cfa	253	Canis familiaris	Dog
bta	238	Bos taurus	Aurochs
gga	135	Gallus gallus	Red Junglefowl, chicken
mdo	112	Monodelphis domestica	Short-tailed gray opossum
xtr	112	Xenopus tropicalis	Western clawed frog
fru	111	Fugu rubripes	Puffer fish
tni	111	Tetraodon nigroviridis	Green puffer
oan	96	Ornithorhynchus anatinus	Duckbill platypus
ssc	69	Sus scrofa	Wild Boar
sme	61	Schmidtea mediterranea	Freshwater planarian flatworm
odi	51	Oikopleura dioica	Tunicate
aga	45	Anopheles gambiae	African malaria mosquito
ame	45	Apis mellifera	Honeybee
tca	36	Tribolium castaneum	Darkling Beetle
cin	29	Ciona intestinalis	Transparent sea squirt
bmo	27	Bombyx mori	Silk moth
csa	21	Ciona savignyi	Pacific transparent sea squirt
mdv2	19	Mareks disease virus type 2	MDV-2
mdv1	18	Mareks disease virus	MDV
bfl	13	Branchiostoma floridae	Florida lancelet
lgi	13	Lottia gigantea	Owl limpet
sko	12	Saccoglossus kowalevskii	Acorn worm
lmi	4	Locusta migratoria	Migratory locust
oar	3	Ovis aries	Red Sheep
cgr	1	Cricetulus griseus	Chinese hamster

Control Features

Phalanx Biotech’s Model Organisms I & II miRNA OneArray contains 129 control probes of 26 unique sequences.
The sequences have been drawn from a variety of organisms to act as positive and negative controls.
Additional Phalanx Biotech controls have been developed specifically to act as negative controls or spike-ins (PH_mrc_000001 – PH_mrc_00006).

Table 5: Model Organisms miRNA OneArray™ Control Features
Probe ID	Control Type	Number on Array
PH_c_0000001	Grid Alignment	36
PH_mrc_000001 – PH_mrc_00006	Spike-in / Negative control	36
PH_mrc_0000007	RNA u6/ human	3
PH_mrc_0000008	RNA U4	3
PH_mrc_0000009	RNA U3	3
PH_mrc_0000010	RNA U2/ human	3
PH_mrc_0000011	RNA U8	3
PH_mrc_0000012	m-73B	3
PH_mrc_0000013	m-3b	3
PH_mrc_0000014	rat u5a	3
PH_mrc_0000015	U1 human	3
PH_mrc_0000016	U2ara.fish.mouse	3
PH_mrc_0000017	u4human	3
PH_mrc_0000018	u6 human	3

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