Publications

Publications (120)
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  1. Yung-song Wang, Wen-wen Chou, Ku-chung Chen, Hsin-yun Cheng, Ruey-tay Lin, Suh-hang Hank Juo microRNA-152 Mediates DNMT1-Regulated DNA Methylation in the Estrogen Receptor ? Gene Plos One. 7(1): e30635. doi:10.1371/journal.pone.0030635. (Link)
  2. Ji Hae Lee, Boram Cho, Hee-jin Jun, Woo-duck Seo, Dong-woo Kim, Kang-jin Cho, And Sung-joon Lee Momilactione B inhibits protein kinase A signaling and reduces tyrosinase-related proteins 1 and 2 expression in melanocytes Biotechnol Lett. DOI 10.1007/s10529-011-0838-7. (Link)
  3. Pei-shi Ong, Sui-yung Chan, Paul C. Ho Microarray analysis revealed dysregulation of multiple genes associated with chemoresistance to As2O3 and increased tumor aggressiveness in a newly established arsenic-resistant ovarian cancer cell line, OVCAR-3/AsR European Journal Of Pharmaceutical Sciences. 45 (2012) 367–378. (Link)
  4. Keyi Liu, Linlin Chen, Ravinder Kaur, Michael Pichichero Transcriptome signature in young children with acute otitis media due to Streptococcus pneumoniae Microbes And Infection. xx (2012) 1 - 10. (Link)
  5. Margarita Bonilla-claudio, Jun Wang, Yan Bai, Elzbieta Klysik, Jennifer Selever, And James F. Martin Bmp signaling regulates a dose-dependent transcriptional program to control facial skeletal development Development. 139, 709-719 (2012). (Link)
  6. Natasha C. Lucki, Sibali Bandyopadhyay, Elaine Wang, Alfred H. Merrill, And Marion B. Sewer Acid Ceramidase (ASAH1) Is a Global Regulator of Steroidogenic Capacity and Adrenocortical Gene Expression Mol Endocrinol. 26(2):228–243. (Link)
  7. Li Chen, Yanlin Ma, Eun Young Kim, Wei Yu, Robert J. Schwartz, Ling Qian, Jun Wang Conditional Ablation of Ezh2 in Murine Hearts Reveals Its Essential Roles in Endocardial Cushion Formation, Cardiomyocyte Proliferation and Survival Plos One. 7(2): e31005. doi:10.1371/journal.pone.0031005. (Link)
  8. Ying Yang, Xiaogang Shu, Dan Liu, You Shang, Yan Wu, Lei Pei, Xin Xu, Qing Tian, Jian Zhang, Kun Qian, Ya-xian Wang, Ronald S. Petralia, Weihong Tu, Ling-qiang Zhu, Jian-zhi Wang, And Youming Lu EPAC Null Mutation Impairs Learning and Social Interactions via Aberrant Regulation of miR-124 and Zif268 Translation Neuron. 73, 774–788. (Link)
  9. Chung-ta Chang, Tin-yun Ho, Ho Lin, Ji-an Liang, Hui-chi Huang, Chia-cheng Li, Hsin-yi Lo, Shih-lu Wu, Yi-fang Huang, Chien-yun Hsiang 5-Fluorouracil Induced Intestinal Mucositis via Nuclear Factor-?B Activation by Transcriptomic Analysis and In Vivo Bioluminescence Imaging Plos One. 7(3): e31808. doi:10.1371/journal.pone.0031808. (Link)
  10. Chia-hung Kao, Chien-yun Hsiang, Tin-yun Ho Assessment of Chitosan-Affected Metabolic Response by Peroxisome Proliferator-Activated Receptor Bioluminescent Imaging-Guided Transcriptomic Analysis Plos One. 7(4): e34969. doi:10.1371/journal.pone.0034969. (Link)
  11. Toke Peter Krogager, Lone Vendel Nielsen, Steffen Bak, Clifford Young, Carla Ferreri, Ole Nørregaard Jensen, Peter Højrup, Vladimiros Thoma, Ida B. Thøgersen, Jan J. Enghild Identification of a potential biomarker panel for the intake of the common dietary trans fat elaidic acid (trans?9-C18:1) Journal Of Proteomics. doi:10.1016/j.jprot.2012.03.023. (Link)
  12. Chun-yin Huang, Yu-hsuan Chou, Nien-tsu Hsieh, Hsin-hung Chen, And Ming-fen Lee MED28 Regulates MEK1-dependent Cellular Migration in Human Breast Cancer Cells Journal Of Cellular Physiology. doi:10.1002/jcp.24093. (Link)
  13. Suping Zhang, Liguang Chen, Bing Cui, Han-yu Chuang, Jianqiang Yu, Jessica Wang-rodriguez, Li Tang, George Chen, Grzegorz W. Basak, Thomas J. Kipps ROR1 Is Expressed in Human Breast Cancer and Associated with Enhanced Tumor-Cell Growth Plos One. 7(3): e31127. doi:10.1371/journal.pone.0031127. (Link)
  14. Jee Young Kwon, Jung Min Kim, Young Hoon Ji & Young Rok Seo Genome-wide microarray investigation of molecular targets and signaling networks in response to high-LET neutron in in vivo-mimic spheroid of human carcinoma Mol Cell Toxicol. (2012) 8:9-18. (Link)
  15. Lambros Mp, Parsa C, Mulamalla H, Orlando R, Lau B, Huang Y, Pon D, Chow M. Identifying cell and molecular stress after radiation in a three-dimensional (3-D) model of oral mucositis Biochemical And Biophysical Research Communications. 2011, 405(1):102-106. (Link)
  16. Enquobahrie Da, Williams Ma, Qiu C, Siscovick Ds, Sorensen Tk. Global maternal early pregnancy peripheral blood mRNA and miRNA expression profiles according to plasma 25-hydroxyvitamin D concentrations J Matern Fetal Neonatal Med. 2011 Jan 11 (in print). (Link)
  17. Xinna Zhang, Guohui Wan, Franklin G. Berger, Xiaoming He, Xiongbin Lu. The ATM Kinase Induces MicroRNA Biogenesis in the DNA Damage Response Molecular Cell. 2011, 41(4):371-383. (Link)
  18. Udensi K. Udensi, Hari H.p. Cohly, Barbara E. Graham-evans, Kenneth Ndebele, Nat?lia Garcia-reyero, Bindu Nanduri, Paul B. Tchounwou, Raphael D. Isokpehi. Aberrantly Expressed Genes in HaCaT Keratinocytes Chronically Exposed to Arsenic Trioxide Libertas Academica. 2011, 6:7-16. (Link)
  19. Cai W, Sun Y, Wang W, Han C, Ouchida M, Xia W, Zhao X, Sun B. The Effect of SYT-SSX and Extracellular Signal-Regulated Kinase (ERK) on Cell Proliferation in Synovial Sarcoma Pathol Oncol Res. 2011, 17(2):357-367. (Link)
  20. Sehic A, Risnes S, Khuu C, Khan Qe, Osmundsen H. Effects of in vivo transfection with anti-miR-214 on gene expression in murine molar tooth germ Physiol Genomics. 2011, 43(9):488-498. (Link)
  21. Dhiman R, Bandaru A, Barnes Pf, Saha S, Tvinnereim A, Nayak Rc, Paidipally P, Valluri Vl, Rao Lv, Vankayalapati R. c-Maf-dependent growth of Mycobacterium tuberculosis in a CD14(hi) subpopulation of monocyte-derived macrophages J Immunology. 2011, 186(3):1638-1645. (Link)
  22. Wang J, Chen L, Wen S, Zhu H, Yu W, Moskowitz Ip, Shaw Gm, Finnell Rh, Schwartz Rj. Defective sumoylation pathway directs congenital heart disease Birth Defects Res A Clin Mol Teratol. 2011, 91(6):468-476. (Link)
  23. Zhu Xl, Zeng Yf, Guan J, Li Yf, Deng Yj, Bian Xw, Ding Yq, Liang L. FMNL2 is a positive regulator of cell motility and metastasis in colorectal carcinoma J Pathol. 2011, 224(3):377-388. (Link)
  24. Qu Y, Wang J, Ray Ps, Guo H, Huang J, Shin-sim M, Bukoye Ba, Liu B, Lee Av, Lin X, Huang P, Martens Jw, Giuliano Ae, Zhang N, Cheng Nh, Cui X. Thioredoxin-like 2 regulates human cancer cell growth and metastasis via redox homeostasis and NF-?B signaling J Clin Invest. 2011, 121(1):212-225.. (Link)
  25. Wu J, Liu Z, Shao C, Gong Y, Hernando E, Lee P, Narita M, Muller W, Liu J, Wei Jj. HMGA2 overexpression-induced ovarian surface epithelial transformation is mediated through regulation of EMT genes Cancer Res. 2011, 71(2):349-359. (Link)
  26. Fuchs G, Diges C, Kohlstaedt La, Wehner Ka, Sarnow P. Proteomic Analysis of Ribosomes: Translational Control of mRNA Populations by Glycogen Synthase GYS1 J Mol Biol. 2011, 410(1):118-130. (Link)
  27. Mahmoud L, Al-saif M, Amer Hm, Sheikh M, Almajhdi Fn, Khabar Ks. GFP Reporter System with Transcriptional Sequence Heterogeneity for Monitoring Interferon Response J. Virol. 2011. (Link)
  28. Fan Lc, Chiang Wf, Liang Ch, Tsai Yt, Wong Ty, Chen Kc, Hong Tm, Chen Yl. ?-Catulin knockdown induces senescence in cancer cells. Oncogene. Jun 9; 30(23):2610-21.. (Link)
  29. Wang Cy, Hua Cy, Hsu He, Hsu Cl, Tseng Hy, Wright De, Hsu Ph, Jen Ch, Lin Cy, Wu My, Tsai Md, Kao Cf. The C-Terminus of Histone H2B Is Involved in Chromatin Compaction Specifically at Telomeres, Independently of Its Monoubiquitylation at Lysine 123 Plos One.. 2011, 6(7):e22209. Epub 2011 Jul 29.. (Link)
  30. Han X, Wu Z, Di J, Pan Y, Zhang H, Du Y, Cheng Z, Jin Z, Wang Z, Zheng Q, Zhang P, Wang Y. CXCL9 attenuated chemotherapy-induced intestinal mucositis by inhibiting proliferation and reducing apoptosis. Biomed Pharmacother.. 2011 Jun 23.. (Link)
  31. Spencer C, Montalvo J, Mclaughlin Sr, Bryan Ba. Small Molecule Inhibition of Cytoskeletal Dynamics in Melanoma Tumors Results in Altered Transcriptional Expression Patterns of Key Genes Involved in Tumor Initiation and Progression Cancer Genomics Proteomics. 2011 Mar-Apr; 8(2):77-85.. (Link)
  32. Jia Qing Shen, Jie Shen, Xing Peng Wang. Expression of insulin-like growth factor binding protein-4 (IGFBP-4) in acute pancreatitis induced by l-arginine in mice Acta Histochem. [Epub ahead of print]. (Link)
  33. Q Chang Ct, Lin H, Ho Ty, Li Cc, Lo Hy, Wu Sl, Huang Yf, Liang Ja, Hsiang Cy. Comprehensive Assessment of Host Responses to Ionizing Radiation by Nuclear Factor-?B Bioluminescence Imaging-Guided Transcriptomic Analysis Plos One. 6(8):e23682. Epub 2011 Aug 24.. (Link)
  34. Saini S, Yamamura S, Majid S, Shahryari V, Hirata H, Tanaka Y, Dahiya R. MicroRNA-708 induces apoptosis and suppresses tumorigenicity in renal cancer cells Cancer Research. 2011 Aug 18. [Epub ahead of print]. (Link)
  35. Kusum Rathore, Hwa-chain Robert Wang. Green tea catechin extract in intervention of chronic breast cell carcinogenesis induced by environmental carcinogens Molecular Carcinogenesis. 2011 Aug 31. [Epub ahead of print]. (Link)
  36. Huber K, Doyon G, Plaks J, Fyne E, Mellors Jw, Sluis-cremer N. Inhibitors of histone deacetylases: correlation between isoform specificity and reactivation of HIV type 1 (HIV-1) from latently infected cells. The Journal Of Biological Chemistry. 286(25):22211-8. (Link)
  37. Wu Mt, Lee Tc, Wu Ic, Su Hj, Huang Jl, Peng Cy, Wang W, Chou Ty, Lin My, Lin Wy, Huang Ct, Pan Ch, Ho Ck. Whole Genome Expression in Peripheral-Blood Samples of Workers Professionally Exposed to Polycyclic Aromatic Hydrocarbons. Chemical Research In Toxicology. 2011 Sep 2. [Epub ahead of print]. (Link)
  38. Yonju Ha, Ying Dun, Muthusamy Thangaraju, Jennifer Duplantier, Zheng Dong, Kebin Liu, Vadivel Ganapathy, And Sylvia B. Smith Sigma Receptor 1 Modulates Endoplasmic Reticulum Stressin Retinal Neurons Investigative Ophthalmology & Visualscience. January 2011,Vol. 52, No. 1. (Link)
  39. Jine Yang, Xiaolin Hu, Mary Zimmerman, Christina M. Torres, Dafeng Yang, Sylvia B. Smith, And Kebin Liu IRF8 Regulates BaxTranscription In Vivo in PrimaryMyeloid Cells The Journal Of Immunology. 2011, 187. (Link)
  40. Ding-lieh Liao, Min-chih Cheng, Chih-hao Lai, Hui-ju Tsai, Chia-hsiang Chen Comparative gene expression profiling analysis of lymphoblastoid cells reveals neuron-specific enolase gene (ENO2) as a susceptibility gene of heroin dependence Addiction Biology. 2011 Oct 13. doi: 10.1111/j.1369-1600.2011.00390.x. [Epub ahead of print]. (Link)
  41. Pan Chen, Xia-yu Li, Li-yang Zhang, Wei Xiong, Ming Zhou, Lan Xiao, Fang Zeng, Xiao-ling Li, Ming-hua Wu, And Gui-yuan Li Grade-Specific Expression Profiles of miRNAs/mRNAs and Docking Study in Human Grade I-III Astrocytomas Omics. 2011 Oct;15(10):673-82. (Link)
  42. Yana G Kamberov , Jihoon Kim , Ralph Mazitschek , Winston P Kuo And Malcolm Whitman Microarray profiling reveals the integrated stress response is activated by halofuginone in mammary epithelial cells Bmc Research Notes. 2011 Oct 5;4:381. (Link)
  43. Pingsen Zhao, Lili Zhao, Tao Zhang, Hualei Wang, Chuan Qin, Songtao Yang, Xianzhu Xia Changes in microRNA expression induced by rabies virus infection in mouse brains Microbial Pathogenesis. 2011 Oct 12. [Epub ahead of print]. (Link)
  44. Rong Zhang, Yifeng He, Xueli Zhang, Baolin Xing, Youhua Sheng, Huan Lu, Zhenhong Wei Estrogen receptor-regulated microRNAs contribute to the BCL2/BAX imbalance in endometrial adenocarcinoma and precancerous lesions Cancer Letters. 2011 Sep 29. [Epub ahead of print]. (Link)
  45. Huihui Chen, Hui Sun, Fuping You, Wenxiang Sun, Xiang Zhou, Lu Chen, Jing Yang, Yutao Wang, Hong Tang, Yukun Guan, Weiwei Xia, Jun Gu, Hiroki Ishikawa, Delia Gutman, Glen Barber, Zhihai Qin, Zhengfan Jiang Activation of STAT6 by STING Is Critical for Antiviral Innate Immunity Cell. 2011 Oct 14;147(2):436-46.. (Link)
  46. Rachana Sainger, Juan B. Grau, Emanuela Branchetti, Paolo Poggio, William F. Seefried, Benjamin C. Field, Michael A. Acker, Robert C. Gorman, Joseph H. Gorman Iii, Clark W. Hargrove Iii, Joseph E. Bavaria, And Giovanni Ferrari Human myxomatous mitral valve prolapse: Role of bone morphogenetic protein 4 in valvular interstitial cell activation J Cell Physiol. 2011 Nov 21. doi: 10.1002/jcp.22999. (Link)
  47. N. Chin Lai, Tong Tang, Mei Hua Gao, Miho Sato, Atsushi Miyanohara, And H. Kirk Hammond Improved Function of the Failing Rat Heart by Regulated Expression of Insulin-like Growth Factor-I via Intramuscular Gene Transfer Hum Gene Ther. 2011 Oct 21. [Epub ahead of print]. (Link)
  48. Pingsen Zhao, Lili Zhao, Tao Zhang, Yinglin Qi, Tiecheng Wang, Kejian Liu, Hualei Wang, Hao Feng, Hongli Jin, Chuan Qin, Songtao Yang, Xianzhu Xia Innate immune response gene expression profiles in central nervous system of mice infected with rabies virus Comparative Immunology, Microbiology And Infectious Diseases. 2011 Dec;34(6):503-12. (Link)
  49. Weidan Peng, Yunhua Bao, And Janet A. Sawicki Epithelial cell-targeted transgene expression enables isolation of cyan fluorescent protein (CFP)-expressing prostate stem/progenitor cells Transgenic Res. 2011 Oct;20(5):1073-86. (Link)
  50. Katerina Stechova, Michal Kolar, Radek Blatny, Zbynek Halbhuber, Jana Vcelakova, Miluse Hubackova, Lenka Petruzelkova, Zdenek Sumnik, Barbora Obermannova, Pavlina Pithova, Vendula Stavikova, Maria Krivjanska, Ales Neuwirth, Stanislava Kolouskova, Dominik Filipp Healthy first degree relatives of patients with type 1 diabetes exhibit significant differences in basal gene expression pattern of immunocompetent cells compared to controls: expression pattern as predeterminant of autoimmune diabetes Clinical Immunology. 2011 Sep 16. doi: 10.1111/j.1365-3083.2011.02637.x. [Epub ahead of print]. (Link)
  51. Chanjae Park, Wei Yan, Sean M. Ward, Sung Jin Hwang, Qiuxia Wu, William J. Hatton, Jong Kun Park, Kenton M. Sanders, Seungil Ro MicroRNAs Dynamically Remodel Gastrointestinal Smooth Muscle Cells Plos One. 2011 Apr 14;6(4):e18628 . (Link)
  52. Eunyoungkim, Lichen, Yanlinma, Weiyu, Jiangchang, Ivan P.moskowitz, Junwang Enhanced desumoylation in murine hearts by overexpressed SENP2 leads to congenital heart defects and cardiac dysfunction Journal Of Molecular And Cellular Cardiology. 2011 Dec 1. [Epub ahead of print]. (Link)
  53. Yen-yin Tsai, Yi-hueihuang, Ya-li Chao, Kuang-yu Hu, Li-te Chin, Shiu-huey Chou, Ai-ling Hour, Yeong-deryao, Chi-shun Tu, Yao-jen Liang, Cheng-yuhtsai, Hao-yu Wu, Shan-wentan, And Han-min Chen Identification of the Nanogold Particle-Induced Endoplasmic Reticulum Stress by Omic Techniques and Systems Biology Analysis Acs Nano. 2011 Dec 27;5(12):9354-69. Epub 2011 Nov 22.. (Link)
  54. Hui Zhao, Joel Deneau, Ginny O.l. Che, Shang Li, Frederic Vagnini, Parastoo Azadi, Roberto Sonon, Ravi Ramjit, Simon M.y. Lee, Krzysztof Bojanowski Angelica sinensis isolate SBD.4: composition, gene expression profiling, mechanism of action and effect on wounds, in rats and humans Eur J Dermatol. 2011 (epub ahead of print) doi:10.1684/ejd.2011.1599. (Link)
  55. Chun-liang Tung, Pei-hsuan Hou, Yung-ling Kao, Yu-wn Huang, Chiung-chun Shen, Yi-hsin Cheng, Shu-fen Wu, Moon-sing Lee, Chin Li SOX2 modulates alternative splicing in transitional cell carcinoma. Biochemical And Biophysical Research Communications. 2010, 393(3):420-425. (Link)
  56. Lei Guo, Qiang Shi, Stacey Dial, Qingsu Xia, Nan Mei, Quan-zhen Li, Po-chuen Chan, Peter Fu. Gene expression profiling in male B6C3F1 mouse livers exposed to kava identifies – Changes in drug metabolizing genes and potential mechanisms linked to kava toxicity. Food Chem Toxicol. 2010, 48(2):686-696. (Link)
  57. Lei Guo, Nan Mei, Wayne Liao, Po-chuen Chan, And Peter P. Fu. Ginkgo Biloba Extract Induces Gene Expression Changes in Xenobiotics Metabolism and the Myc-Centered Network. Omics: A Journal Of Integrative Biology. 2010, 14(1):75-90. (Link)
  58. Yen Kuang Li, Den-kai Yang, Yun-chu Chen, Hung-ju Su, Jui-chuang Wu, Yui Whei Chen-yang. A novel three-dimensional aerogel biochip for molecular recognition of nucleotide acids. Acta Biomaterialia. 2010, 6(4):1462-1470. (Link)
  59. Zhang D, Deng X, Ji Z, Shen X, Dong L, Wu M, Gu T, Liu Y. Long-term hepatotoxicity of polyethylene-glycol functionalized multi-walled carbon nanotubes in mice. Nanotechnology. 2010, 21(17):175101. (Link)
  60. Fong S, King F, Shtivelman E. CC3/TIP30 affects DNA damage repair. Bmc Cell Biol. 2010, 11:23. (Link)
  61. Jsehic A, Risnes S, Khan Qe, Khuu C, Osmundsen H. Gene expression and dental enamel structure in developing mouse incisor. Eur J Oral Sci. 2010, 118(2):118-130. (Link)
  62. Wang J, Klysik E, Sood S, Johnson Rl, Wehrens Xh, Martin Jf. Pitx2 prevents susceptibility to atrial arrhythmias by inhibiting left-sided pacemaker specification. Pnas. 2010, 107(21):9753-9758. (Link)
  63. Li Yan,wen Liu,chen De-yu. Expression and regulation of HES1 in sperms with low motility from asthenospermia patients. Basic & Clinical Medicine. 2010, 30:5. (Link)
  64. Lai Cy, Hung Jt, Lin Hh, Yu Al, Chen Sh, Tsai Yc, Shao Le, Yang Wb, Yu J. Immunomodulatory and adjuvant activities of a polysaccharide extract of Ganoderma lucidum in vivo and in vitro. Vaccine. 2010, 28(31):4945-4954. (Link)
  65. Jun-mo Yang, Seon Mi Sim, Hyo-yeon Kim, Geon Tae Park. Expression of the homeobox gene, HOPX, is modulated by cell differentiation in human keratinocytes and is involved in the expression of differentiation markers. European Journal Of Cell Biology. 2010, 89(7):537-546. (Link)
  66. Hank H. Qi, Madathia Sarkissian, Gang-qing Hu, Zhibin Wang, Arindam Bhattacharjee, D. Benjamin Gordon, Michelle Gonzales, Fei Lan, Pat P. Ongusaha, Maite Huarte, Nasser K. Yaghi, Huijun Lim, Benjamin A. Garcia, Leonardo Brizuela, Keji Zhao, Thomas M. Roberts & Yang Shi. Histone H4K20/H3K9 demethylase PHF8 regulates zebrafish brain and craniofacial development. Nature. 2010, 466(7305):503-507. (Link)
  67. Hsiao Yh, Su Ya, Tsai Hd, Mason Jt, Chou Mc, Man Yg. Increased invasiveness and aggressiveness in breast epithelia with cytoplasmic p63 expression. Int. J. Biol. Sci. 2010, 6(5):428-442. (Link)
  68. Cheng Hm, Li Cc, Chen Cy, Lo Hy, Cheng Wy, Lee Ch, Yang Sz, Wu Sl, Hsiang Cy, Ho Ty. Application of bioactivity database of Chinese herbal medicine on the therapeutic prediction, drug development, and safety evaluation. Journal Of Ethnopharmacology. 2010, 132(2):429-437. (Link)
  69. Zhenqian Wu, Xiaodong Han, Shenyin Qin, Qi Zheng, Zhigang Wang, Di Xiang, Jing Zhang, Huili Lu, Mingyuan Wu, Shunying Zhu, Yan Yu, Yu Wang And Wei Han. Interleukin 1 receptor antagonist reduces lethality and intestinal toxicity of 5-?uorouracil in a mouse mucositis model. Biomedicine & Pharmacotherapy. 2010, 64(9):589-593. (Link)
  70. Saugata Mahapatra, Patricia Ayoubi And Edward I Shaw. Coxiella burnetii Nine Mile II proteins modulate gene expression of monocytic host cells during infection. Bmc Microbiology. 2010, 10:244. (Link)
  71. Kim Jh, Moon Jy, Park Ey, Lee Kh, Hong Yc. Changes in Oxidative Stress Biomarker and Gene Expression Levels in Workers Exposed to Volatile Organic Compounds. Ind Health. 2011, 49(1):8-14. (Link)
  72. Yong Jiang, Guangli Suo, Anil Sadarangani, Bryan Cowan, And Jean Y. J. Wang. Expression Profiling of Protein Tyrosine Kinases and Their Ligand Activators in Leiomyoma Uteri. Systems Biology In Reproductive Medicine. 2010, 56(4):318-326. (Link)
  73. Lei Guo; Nan Mei; Qingsu Xia; Tao Chen; Po-chuen Chan; Peter P. Fu. Gene Expression Profiling as an Initial Approach for Mechanistic Studies of Toxicity and Tumorigenicity of Herbal Plants and Herbal Dietary Supplements. Journal Of Environmental Science And Health. 2010, 28(1):60-87. (Link)
  74. Yonju Ha, Ying Dun, Muthusamy Thangaraju, Jennifer N Duplantier, Zheng Dong, Kebin Liu, Vadivel Ganapathy, And Sylvia B Smith. Sigma receptor 1 modulates ER stress in retinal neurons. Invest Ophthalmol Vis Sci. 2010, 52(1):527-540. (Link)
  75. Seung-hyun Jungab, Seon-hee Yimac, Hae-jin Huab, Chan-kwon Jungc, Sug-hyung Leed, Dong Hoon Kime, Yeun-jun Chung. Copy number alterations and expression profiles of candidate genes in a pulmonary inflammatory myofibroblastic tumor. Lung Cancer. 2010, 70(2):152-157. (Link)
  76. Assidi M, Montag M, Van Der Ven K, Sirard Ma. Biomarkers of human oocyte developmental competence expressed in cumulus cells before ICSI: a preliminary study. J Assist Reprod Genet. 2011, 28(2):173-188. (Link)
  77. Yanqin Li , Qiang Zhang , Xiaolei Yin , Weifeng Yang , Yuanyuan Du , Pingping Hou , Jian Ge , Chun Liu, Weiqi Zhang, Xu Zhang1,, Yetao Wu1,, Honggang Li, Kang Liu, Chen Wu1,, Zhihua Song, Yang Zhao, Yan Shi, Hongkui Deng. Generation of iPSCs from mouse fibroblasts with a single gene, Oct4, and small molecules. Cell Research. 2010, 21(1):196-204. (Link)
  78. Yin B, Li Kh, An T, Chen T, Peng Xz. Nectin-like molecule 1 inhibits the migration and invasion of U251 glioma cells by regulating the expression of an extracellular matrix protein osteopontin. Chinese Medical Sciences Journal. 2010, 25(2):100-104. (Link)
  79. Koh Y, Kim Dy, Park Sh, Jung Sh, Park E, Kim Hj, Sohn Sk, Joo Yd, Kim Sj, Shin Hj, Kim Sh, Song Hs, Chung J, Kim I, Yoon Ss, Kim Bk, Shin Sh, Chung Yj, Park S. GSTT1 copy number gain is a poor predictive marker for escalated-dose imatinib treatment in chronic myeloid leukemia: genetic predictive marker found using array comparative genomic hybridization. Cancer Genet Cytogenet. 2010, 203(2):215-221. (Link)
  80. Kumar Vb, Yuan Tc, Liou Jw, Yang Cj, Sung Pj, Weng Cf. Antroquinonol inhibits NSCLC proliferation by altering PI3K/mTOR proteins and miRNA expression profiles Mutat Res. 2010, 707(1-2):42-52. (Link)
  81. Chen Yy, Chiang Sy, Wu Hc, Kao St, Hsiang Cy, Ho Ty, Lin Jg. Microarray analysis reveals the inhibition of nuclear factor-kappa B signaling by aristolochic acid in normal human kidney (HK-2) cells Acta Pharmacol Sin. 2010, 31(2):227-236. (Link)
  82. Janvilisri T, Scaria J, Chang Yf. Transcriptional profiling of Clostridium difficile and Caco-2 cells during infection J Infect Dis. 2010, 202(2):282-290. (Link)
  83. Keyi Liu, Janet Casey, And Michael Pichichero Serum Intercellular Adhesion Molecule 1 Variations in Young Children with Acute Otitis Media Clinical Andvaccine Immunology. Dec. 2010, p.1909–1916. (Link)
  84. Kai Ren Jiang, Jie-len Huang, Chia-chun Chen, Hung-ju Su, Jui-chuang Wu Effect of co-axially hybridized gene targets on hybridization efficiency of microarrayed DNA probes Journal Of The Taiwan Institute Of Chemical Engineers. Volume 42, Issue 1, January 2011, Pages 5-12. (Link)
  85. Sarah K. Norton, Anthony Dellinger, Zhiguo Zhou, Robert Lenk, Darren Macfarland, Becky Vonakis, Daniel Conrad, And Christopher L. Kepley A New Class of Human Mast Cell and Peripheral Blood Basophil Stabilizers that Differentially Control Allergic Mediator Release Clin Transl Sci. 2010 Aug;3(4):158-69. (Link)
  86. Yu-i Weng, Tim H.-m. Huang, And Pearlly S. Yan Methylated DNA Immunoprecipitation and Microarray-Based Analysis: Detection of DNA Methylation in Breast Cancer Cell Lines Methods Mol Biol. 2009;590:165-76. (Link)
  87. Guidong Yao, Mianmian Yin, Jie Lian, Hui Tian, Lin Liu, Xin Li, And Fei Sun MicroRNA-224 Is Involved in Transforming Growth Factor-?-Mediated Mouse Granulosa Cell Proliferation and Granulosa Cell Function by Targeting Smad4 Mol Endocrinol. 2010 Mar;24(3):540-51. (Link)
  88. Microsugar Chang, Jong-kai Hsiao, Ming Yao, Li-ying Chien, Szu-chun Hsu, Bor-sheng Ko, Shin-tai Chen, Hon-man Liu, Yao-chang Chen, Chung-shi Yang And Dong-ming Huang Homologous RBC-derived vesicles as ultrasmall carriers of iron oxide for magnetic resonance imaging of stem cells Nanotechnology. 2010 Jun 11;21(23):235103. (Link)
  89. Jie Li, Wei Xia, Baochun Huang, Liucun Chen, Xueting Su, Shaohua Li, Fang Wang, Hongmei Ding, Ningsheng Shao A strategy to rapidly identify the functional targets of microRNAs by combining bioinformatics and mRNA cytoplasmic/nucleic ratios in culture cells Febs Letters. 584 (2010) 3198–3202. (Link)
  90. Liang Ja, Wu Sl, Lo Hy, Hsiang Cy, Ho Ty. Vanillin Inhibits Matrix Metalloproteinase-9 Expression through Down-Regulation of Nuclear Factor- B Signaling Pathway in Human Hepatocellular Carcinoma Cells. Molecular Pharmacology. 2009, 75(1):151-157. (Link)
  91. Wu Xx, Wan T, Wu Hj, Zhi G, Xiao Cs, Gao Cq, Wu Jj. Identification of differentially expressed genes in myocardium of patients with heart failure by human whole genomic oligonucleotide microarray-assisted pathways analysis. Zhonghua Xin Xue Guan Bing Za Zhi. 2009, 37(2):120-125. (Link)
  92. Lynn Ks, Li Ll, Lin Yj, Wang Ch, Sheng Sh, Lin Jh, Liao W, Hsu Wl, Pan Wh A neural network model for constructing endophenotypes of common complex diseases: an application to male young-onset hypertension microarray data. Bioinformatics. 2009, 25(8):981-988. (Link)
  93. Su Sy, Hsieh Cl, Wu Sl, Cheng Wy, Li Cc, Lo Hy, Ho Ty, Hsiang Cy. Transcriptomic analysis of EGb 761-regulated neuroactive receptor pathway in vivo. Journal Of Ethnopharmacology. 2009, 123:68-73. (Link)
  94. Younghoon Kim , Sejong Oh , Sungsu Park , Sae Hun Kim. Interactive transcriptome analysis of enterohemorrhagic Escherichia coli+H23 (EHEC) O157:H7 and intestinal epithelial HT-29 cells after bacterial attachment. International Journal Of Food Microbiology. 2009, 131(2-3):224-232. (Link)
  95. Vera Huang, Xin Lu, Yong Jiang And Jean Yj Wang. Effect of hydroxyurea on the promoter occupancy profiles of tumor suppressor p53 and p73. Bmc Biology. 2009, 7:35. (Link)
  96. Hsiang Cy, Chen Ys, Ho Ty. Nuclear factor-kB bioluminescence imaging-guided transcriptomic analysis for the assessment of host–biomaterial interaction in vivo. Biomaterials. 2009, 30(17):3042-3049. (Link)
  97. Cheng Wy, Lien Jc, Hsiang Cy, Wu Sl, Li Cc, Lo Hy, Chen Jc, Chiang Sy, Liang Ja, Ho Ty. Comprehensive evaluation of a novel nuclear factor-kB inhibitor, quinoclamine, by transcriptomic analysis. British Journal Of Pharmacology. 2009, 157(5):746-756. (Link)
  98. Seung-hyun Jung, Seung-hun Shin,seon-hee Yim, Hye-sun Choi, Sug-hyung Lee And Yeun-jun Chung. Integrated analysis of copy number alteration and RNA expression profiles of cancer using a high-resolution whole-genome oligonucleotide array. Experimental And Molecular Medicine. 2009, 41(7):462-470. (Link)
  99. Dana Provaznikova, Vera Geierova, Tereza Kumstyrova, Roman Kotlin, Dana Mikulenkova, Kamila Zurkova, Vaclav Matoska, Ingrid Hrachovinova, & Simon Rittich. Clinical manifestation and molecular genetic characterization of MYH9 disorders. Platelets. 2009, 20(5):289-296. (Link)
  100. Meng Zhao, Hong-wei He, Huan-xing Sun, Kai-huan Ren And Rong-guang Shao Dual knockdown of N-ras and epiregulin synergistically suppressed the growth of human hepatoma cells. Biochemical And Biophysical Research Communications. 2009, 387(2):239-244. (Link)
  101. Tao Deng, Ying Kuang, Long Wang, Jiang Li, Zhugang Wang And Jian Fei An essential role for DNA methyltransferase 3a in melanoma tumorigenesis. Biochemical And Biophysical Research Communications. 2009, 387(2):611-616.. (Link)
  102. Guan-yu Chen, Hsiao-chiao Shiah, Hung-ju Su, Chi-yuan Chen, Yung-jen Chuang, Wen-hsin Lo, Jie-len Huang, Ching-kuang Chuang, Shiaw-min Hwang, And Yu-chen Hu. Baculovirus Transduction of Mesenchymal Stem Cells Triggers the Toll-Like Receptor 3 Pathway. Journal Of Virology. 2009, 83(20):10548-10556. (Link)
  103. Philippe M. Campeau, Moutih Rafei, Marie-no ?le Boivin, Ying Sun, Gregory A. Grabowski, And Jacques Galipeau. Characterization of Gaucher disease bone marrow mesenchymal stromal cells reveals an altered in?ammatory secretome. Blood. 2009, 114(15): 3181-3190. (Link)
  104. Jie Lian, Xiansheng Zhang, Hui Tian, Ning Liang, Yong Wang, Chaozhao Liang, Xin Li And Fei Sun Altered microRNA expression in patients with non-obstructive azoospermia Reprod Biol Endocrinol. 2009, 7:13 doi:10.1186/1477-7827-7-13. (Link)
  105. Zongfei Ji, Danying Zhang, Ling Li, Xizhong Shen, Xiaoyong Deng, Ling Dong, Minhong Wu And Yuanfang Liu The hepatotoxicity of multi-walled carbon nanotubes in mice Nanotechnology. 2009 Nov 4;20(44):445101. (Link)
  106. Fong S, Shoemaker M, Cadaoas J, Lo A, Liao W, Tagliaferri M, Cohen I, Shtivelman E. Molecular mechanisms underlying selective cytotoxic activity of BZL101, an extract of Scutellaria barbata, towards breast cancer cells. Cancer Biology & Therapy. 2008, 7(4):577-586. (Link)
  107. Dan-kai Yang, Jie-len Huang, Chia-chun Chen, Hung-ju Su And Jui-chuang Wu. Enhancement of target-DNA hybridization efficiency by pre-hybridization on sequence-orientated micro-arrayed probes. Journal Of The Chinese Institute Of Chemical Engineers. 2008, 39(3):187-193. (Link)
  108. Nasser El-okdi, Sleiman Smaili, Vanamala Raju, Amjad Shidyak, Shalini Gupta, Larisa Fedorova, Jihad Elkareh, Sankaridrug Periyasamy, Anna P. Shapiro, M. Bashar Kahaleh, Deepak Malhotra, Zijian Xie, Khew Voon Chin, And Joseph I. Shapiro. Effects of cardiotonic steroids on dermal collagen synthesis and wound healing. Journal Of Applied Physiology. 2008, 105(1):30-36. (Link)
  109. Cheng Wy, Wu Sl, Hsiang Cy, Li Cc, Lai Ty, Lo Hy, Shen Ws, Lee Ch, Chen Jc, Wu Hc, Ho Ty. Relationship Between San-Huang-Xie-Xin-Tang and Its Herbal Components on the Gene Expression Profiles in HepG2 Cells. The American Journal Of Chinese Medicine. 2008, 36(4):783-797. (Link)
  110. Yong-bok Jeong, Tae-min Kim And Yeun- Jun Chung. CGHscape: A Software Framework for the Detection and Visualization of Copy Number Alterations. Genomics & Informatics. 2008, 6(3):126-129. (Link)
  111. Eun Ju Lee1, Bo Bin Lee, Soon-ja Kim, Yong-doo Park, Joobae Park And Duk-hwan Kim. Histone deacetylase inhibitor scriptaid induces cell cycle arrest and epigenetic change in colon cancer cells. International Journal Of Oncology. 2008, 33(4):767-776. (Link)
  112. Hao Y, Yin X, Qin H, Zhu F, Liu H, Yang W, Zhang Q, Xiang C, Hou P, Song Z, Liu Y, Yong J, Zhang P, Cai J, Liu M, Li H, Li Y, Qu X, Cui K, Zhang W, Xiang T, Wu Y, Zhao Y, Liu C, Yu C, Yuan K, Lou J, Ding M, Deng H. Two Supporting Factors Greatly Improve the Efficiency of Human iPSC Generation. Cell Stem Cell. 2008, 3(5):475-479. (Link)
  113. Mei N, Guo L, Tseng J, Dial Sl, Liao W, Manjanatha Mg. Gene Expression Changes Associated with Xenobiotic Metabolism Pathways in Mice Exposed to Acrylamide. Environmental And Molecular Mutagenesis. 2008, 49(9):741-745. (Link)
  114. Xiao Fei, Zhang Xin Yan, Zhang Min, Sun Zheng Differential gene expression related to oxidative stress in oral cancer and oral precancerous lesion cells. Beijing Journal Of Stomatology. 2008, 16(6):309-311. (Link)
  115. Sadie L. Marjani, Daniel Le Bourhis, Xavier Vignon, Yvan Heyman, Robin E. Everts, Sandra L. Rodriguez-zas, Harris A. Lewin, Jean-paul Renard, Xiangzhong Yang, X. Cindy Tian Embryonic gene expression profiling using microarray analysis Reprod Fertil Dev. 2009;21(1):22-30. (Link)
  116. Cheng Wy, Hsiang Cy, Bau Dt, Chen Jc, Shen Ws, Li Cc, Lo Hy, Wu Sl, Chiang Sy, Ho Ty. Microarray analysis of vanillin-regulated gene expression profile in human hepatocarcinoma cells. Pharmacological Research. 2007, 56(6):474-482. (Link)
  117. Pan Wh, Lynn Ks, Chen Ch, Wu Yl, Lin Cy, Chang Hy. Using Endophenotypes for Pathway Clusters to Map Complex Disease Genes. Genetic Epidemiology. 2006, 30(2):143-154. (Link)
  118. Ahmed Fe Microarray RNA transcriptional profiling: Part I. Platforms, experimental design and standardization Expert Rev Mol Diagn. 2006 Jul;6(4):535-50. (Link)
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  120. Fan-ching Chien, Jih-shiou Liu, Huang-ju Su, Li-an Kao, Chung-fan Chiou, Wen-yih Chen, Shean-jen Chen An investigation into the influence of secondary structures on DNA hybridization using surface plasmon resonance biosensing Chemical Physics Letters. 397 (2004) 429–434. (Link)

Books (4)

  1. Michael J. Allen, Bela Tiwari, Matthias E. Futschik, and Debbie Lindel. Methods in aquatic virus ecology: Construction of microarrays and their application to virus analysis. MANUAL of AQUATIC VIRAL ECOLOGY, Chapter 5, p.34-56. (2009)
  2. Yu-l Weng, Tim H.-M. Huang, and Pearlly S. Yan. Methylated DNA Immunoprecipitation and Microarray-Based Analysis: Detection of DNA Methylation in Breast Cancer Cell Lines. Molecular Endocrinology, Methods in Molecular Biology 590, Chapter 10, p.165-176. (2009)
  3. Nasser Chegini, PhD and Xiaoping Luo, MD. Gene Expression Profiling in Leiomyoma in Response to GnRH Therapy and TGF-β. Contemporary Endocrinology, Genomics in Endocrinology, Chapter 4, p.67-82. (2008)
  4. Mark Dodgson, John Mathews, Tim Kastelle and Mei-Chih Hu. The evolving nature of Taiwan's national innovation system: The case of biotechnology innovation networks. Research Policy, Volume 37, Issue 3, April 2008, Pages 430-445.(2008)

Posters (6)

  1. A.H.K. Tam, C.M. Wong and I.O.L. Ng. (688) Epigenetic dysregulation of hsa-miR-9 in hepatocellular carcinoma. European Journal of Cancer Supplements. Volume 8, Issue 5, June 2010, Pages 173-174, 21st Meeting of the European Association for Cancer Research.
  2. Ing. Jan Verner, Ph.D., RNDr. Jitka Kabáthová, RNDr. Zbynĕk Zdráhal, Dr., Mgr. Alexandra Tomancová, MUDr. Yvona Brychtová, MUDr. Jana Volejníková, RNDr. Šárka Pospíšilová, Ph.D., prof. MUDr. Jiří Mayer, CSc. Analýza genového proi lu reakce štĕpu proti hostiteli (GVHD) s využitím čipové technologie. V. DNY DIAGNOSTICKÉ, PREDIKTIVNÍ A EXPERIMENTÁLNÍ ONKOLOGIE & II. SYMPOZIUM O CÍLENÉ BIOLOGICKÉ LÉČBĚ (November 25-27, 2009).
  3. Cheng MC, Liao DL, Hsu SH, Lai CH, Chen CH. Identification of genetic risk factors of drug addiction using genomics approach. World Congress on Psychiatric Genetics (October 11-15, 2008).
  4. Lai Y.C., Ma C. and Tyrelle G. D. Whole Genome Microarray Probe Content Interoperability for Diagnostic Applications. International Conference Intelligent Systems for Molecular Biology (July 21-25, 2007).
  5. Tseng J, Chen K, Wang S, Chen I, Kao S, Lai YC, Tyrelle G, Liao W, Pan CC, Jordan B, and Ma C. Standardization and Future Usage Expansion of Gene Expression Microarrays. Advances in Microarray Technology 2006 (October 31-November 02, 2006).
  6. Tseng J, Chen I, Wang S, Chen K, Ho M, Jokhadze G, Liao W, Ma C, and Pan CC. A Push for Usage Expansion in DNA Microarrays-Standardization and Cost. The 12th Annual Chips to Hits (September 12, 2005).