Publications |
| |
37. Cheng HM, Li CC, Chen CY, Lo HY, Cheng WY, Lee CH, Yang SZ, Wu SL, Hsiang CY, Ho TY.
Application of bioactivity database of Chinese herbal medicine on the therapeutic prediction, drug development, and safety evaluation. J Ethnopharmacol. 2010 Aug 14. [Epub ahead of print]. (PubMed) |
| |
36. Hsiao YH, Su YA, Tsai HD, Mason JT, Chou MC, Man YG.
Increased invasiveness and aggressiveness in breast epithelia with cytoplasmic p63 expression. Int J Biol Sci. 2010 Aug 8;6(5):428-42. (PubMed) |
| |
35. Qi HH, Sarkissian M, Hu GQ, Wang Z, Bhattacharjee A, Gordon DB, Gonzales M, Lan F, Ongusaha PP, Huarte M, Yaghi NK, Lim H, Garcia BA, Brizuela L, Zhao K, Roberts TM, Shi Y.
Histone H4K20/H3K9 demethylase PHF8 regulates zebrafish brain and craniofacial development. Nature. 2010 Jul 22;466(7305):503-7. (PubMed) |
| |
34. Jun-Mo Yang, Seon Mi Sim, Hyo-Yeon Kim, Geon Tae Park.
Expression of the homeobox gene, HOPX, is modulated by cell differentiation in human keratinocytes and is involved in the expression of differentiation markers. Eur J Cell Biol. 2010 Jul;89(7):537-46. (PubMed) |
| |
33. Lai CY, Hung JT, Lin HH, Yu AL, Chen SH, Tsai YC, Shao LE, Yang WB, Yu J.
Immunomodulatory and adjuvant activities of a polysaccharide extract of Ganoderma lucidum in vivo and in vitro. Vaccine. 2010 Jul 12;28(31):4945-54. (PubMed) |
| |
32. Wang J, Klysik E, Sood S, Johnson RL, Wehrens XH, Martin JF.
Pitx2 prevents susceptibility to atrial arrhythmias by inhibiting left-sided pacemaker specification. Proc Natl Acad Sci U S A. 2010 May 25;107(21):9753-8. (PubMed) |
| |
31. Sehic A, Risnes S, Khan QE, Khuu C, Osmundsen H.
Gene expression and dental enamel structure in developing mouse incisor. Eur J Oral Sci. 2010 Apr;118(2):118-30. (PubMed) |
| |
30. Fong S, King F, Shtivelman E.
CC3/TIP30 affects DNA damage repair. BMC Cell Biol. 2010 Apr 7;11:23. (PubMed) |
| |
29. Zhang D, Deng X, Ji Z, Shen X, Dong L, Wu M, Gu T, Liu Y.
Long-term hepatotoxicity of polyethylene-glycol functionalized multi-walled carbon nanotubes in mice. Nanotechnology. 2010 Apr 30;21(17):175101. (PubMed) |
| |
28. Yen Kuang Li, Den-Kai Yang, Yun-Chu Chen, Hung-Ju Su, Jui-Chuang Wu, Yui Whei Chen-Yang.
A novel three-dimensional aerogel biochip for molecular recognition of nucleotide acids. Acta Biomater. 2010 Apr;6(4):1462-70. (PubMed) |
| |
27. Lei Guo, Nan Mei, Wayne Liao, Po-Chuen Chan, and Peter P. Fu.
Ginkgo biloba extract induces gene expression changes in xenobiotics metabolism and the Myc-centered network. OMICS. 2010 Feb;14(1):75-90. (PubMed) |
| |
26. Lei Guo a, Qiang Shi, Stacey Dial, Qingsu Xia , Nan Mei, Quan-zhen Li, Po-Chuen Chan, Peter Fu.
Gene expression profiling in male B6C3F1 mouse livers exposed to kava identifies--changes in drug metabolizing genes and potential mechanisms linked to kava toxicity. Food Chem Toxicol. 2010 Feb;48(2):686-96. (PubMed) |
| |
25. Chun-Liang Tung , Pei-Hsuan Hou, Yung-Ling Kao , Yu-Wen Huang, Chiung-Chun Shen, Yi-Hsin Cheng, Shu-Fen Wu, Moon-Sing Lee, Chin Li.
SOX2 modulates alternative splicing in transitional cell carcinoma. Biochem Biophys Res Commun, 2010 Mar 12;393(3):420-5. (PubMed) |
| |
24. Philippe M. Campeau, Moutih Rafei, Marie-Noëlle
Boivin, Ying Sun, Gregory A. Grabowski, and Jacques Galipeau.
Characterization of Gaucher disease bone narrow mesenchymal stromal
cells reveals an altered inflammatory secretome. BLOOD, 8 OCTOBER
2009, VOLUME 114, NUMBER 15:3181-3190. (PubMed) |
| |
23. Guan-Yu
Chen, Hsiao-Chiao Shiah, Hung-Ju
Su, Chi-Yuan Chen, Yung-Jen Chuang, Wen-Hsin Lo, Jie-Len Huang,
Ching-Kuang Chuang, Shiaw-Min Hwang, and Yu-Chen Hu.
Baculovirus
Transduction of Mesenchymal Stem Cells Triggers the Toll-Like
Receptor 3 Pathway. JOURNAL OF VIROLOGY, Oct. 2009, p.10548-10556. (PubMed) |
| |
22. Meng Zhao, Hong-wei He, Huan-xing Sun, Kai-huan Ren and Rong-guang Shao.
Dual knockdown of N-ras and epiregulin synergistically suppressed the growth of human hepatoma cells. Biochemical and Biophysical Research Communications, Volume 387, Issue 2, 18 September 2009, Pages 239-244. (PubMed) |
| |
21. Tao Deng, Ying Kuang, Long Wang, Jiang Li, Zhugang Wang and Jian Fei.
An essential role for DNA methyltransferase 3a in melanoma tumorigenesis. Biochemical and Biophysical Research Communications, Volume 387, Issue 3, 25 September 2009, Pages 611-616. (PubMed) |
| |
20. Provaznikova D, Geierova V, Kumstyrova T, Kotlin R, Mikulenkova D, Zurkova K, Matoska V, Hrachovinova I, Rittich S. Clinical
manifestation and molecular genetic characterization of MYH9
disorders. Platelets, August 2009;20(5):289-296. (PubMed) |
| |
19. Seung-Hyun Jung, Seung-Hun Shin, Seon-Hee
Yim, Hye-Sun Choi, Sug-Hyung Lee, and Yeun-Jun Chung. Integrated
analysis of copy number alteration and RNA expression profiles of
cancer using a high-resolution whole-genome oligonucleotide array.
EXPERIMENTAL and MOLECULAR MEDICINE, Vol. 41, No. 7, 462-470, July
2009. (PubMed) |
| |
18. Cheng WY, Lien JC, Hsiang CY, Wu SL, Li
CC, Lo HY, Chen JC, Chiang SY, Liang JA, Ho TY. Comprehensive
evaluation of a novel nuclear factor-kappaB inhibitor, quinoclamine,
by transcriptomic analysis. Br J Pharmacol. 2009 Jul;157(5):746-56.
Epub 2009 Apr 30. (PubMed) |
| |
17. Hsiang CY, Chen YS, Ho TY. Nuclear factor-kappaB
bioluminescence imaging-guided transcriptomic analysis for the
assessment of host-biomaterial interaction in vivo. Biomaterials.
2009 Jun;30(17):3042-9. Epub 2009 Feb 27. (PubMed) |
| |
16. Vera Huang, Xin Lu, Yong Jiang and Jean YJ
Wang. Effect of hydroxyurea on the promoter occupancy profiles of
tumor suppressor p53 and p73. BMC Biology 2009 Jun 26, 7:35. (PubMed) |
| |
15.
Younghoon Kim, Sejong Oh, Sungsu Park, Sae Hun Kim.
Interactive transcriptome analysis of enterohemorrhagic Escherichia
coli (EHEC) O157:H7 and intestinal epithelial HT-29 cells after
bacterial attachment. Int J Food Microbiol. 2009 May
31;131(2-3):224-32. (PubMed) |
| |
14. Su SY, Hsieh
CL, Wu SL, Cheng WY, Li CC, Lo HY, Ho TY, Hsiang CY.
Transcriptomic
analysis of EGB 761-regulated neuroactive receptor pathway in vivo.
J Ethnopharmacol. 2009 May 4;123(1):68-73. Epub 2009 Mar 4. (PubMed) |
| |
13. Lynn KS, Li LL, Lin YJ, Wang CH, Sheng SH,
Lin JH, Liao W, Hsu WL, Pan WH. A neural network model for
constructing endophenotypes of common complex diseases: an
application to male young-onset hypertension microarray data.
Bioinformatics. 2009 Apr 15;25(8):981-8. Epub 2009 Feb 23. (PubMed) |
| |
12.
Wu XX, Wan T, Wu HJ, Zhi G, Xiao
CS, Gao CQ, Wu JJ. Identification
of differentially expressed genes in myocardium of patients with
heart failure by human whole genomic oligonucleotide
microarray-assisted pathways analysis. Zhonghua Xin Xue Guan Bing Za
Zhi. 2009 Feb; 37(2):120-5. (PubMed) |
| |
11. Liang JA, Wu SL, Lo HY, Hsiang CY, Ho TY.
Vanillin inhibits matrix metalloproteinase-9 expression through
down-regulation of nuclear factor-kappaB signaling pathway in human hepatocellular carcinoma cells. Mol Pharmacol. 2009 Jan;75(1):151-7.
Epub 2008 Oct 3. (PubMed) |
| |
10. Mei N, Guo L, Tseng J,
Dial SL, Liao W, Manjanatha MG. Gene expression changes associated
with xenobiotic metabolism pathways in mice exposed to acrylamide.
Environ Mol Mutagen. 2008 Dec;49(9):741-5. (PubMed) |
| |
9. Zhao Y, Yin X, Qin H, Zhu F, Liu H, Yang
W, Zhang Q, Xiang C, Hou P, Song Z, Liu Y, Yong J,
Zhang P, Cai J, Liu M, Li H, Li Y, Qu X, Cui K, Zhang W, Xiang T, Wu
Y, Zhao Y, Liu C, Yu C, Yuan K, Lou J, Ding M, Deng H. Two
supporting factors greatly improve the efficiency of human iPSC
generation. Cell Stem Cell. 2008 Nov 6;3(5):475-9. (PubMed) |
| |
8. Lee EJ, Lee BB, Kim SJ, Park YD, Park J, Kim DH. Histone deacetylase
inhibitor scriptaid induces cell cycle arrest and epigenetic change
in colon cancer cells. INTERNATIONAL JOURNAL OF ONCOLOGY 2008
Oct;33:767-776. (PubMed) |
| |
7. Yong-Bok Jeong, Tae-Min Kim and Yeun-Jun
Chung. CGHscape: A Software Framework for the Detection and
Visualization of Copy Number Alterations. Genomics & Informatics
Vol. 6(3)126-129, September 2008. (KoreaMed) |
| |
6. Cheng WY, Wu SL, Hsiang CY, Li CC, Lai TY,
Lo HY, Shen WS, Lee CH, Chen JC, Wu HC, Ho TY.
Relationship Between San-Huang-Xie-Xin-Tang and its herbal
components on the gene expression profiles in HepG2 cells. Am J Chin
Med. 2008; 36(4) :783-97. (PubMed) |
| |
5. Nasser El-Okdi, Sleiman Smaili, Vanamala
Raju, Amjad Shalini Gupta, Larisa Fedorova, Jihad Elkareh,
Sankaridrug Periyasamy, Anna P. Shapiro, M. Bashar Kahaleh, Deepak
Malhotra, Zijian Xie, Khew Voon Chin, and Joseph I. Shapiro. Effects
of cardiotonic steroids on dermal collagen synthesis and wound
healing. J Appl Physiol;105:30-36, 2008. (PubMed) |
| |
4. Dan-Kai Yang, Jie-Len Huang, Chia-Chun Chen, Hung-Ju Su and Jui-Chuang Wu. Enhancement of target-DNA hybridization efficiency by pre-hybridization on sequence-orientated micro-arrayed probes. Journal of the Chinese Institute of Chemical Engineers, Volume 39, Issue 3, May 2008, Pages 187-193. (ITRI IR) |
| |
3. Fong S, Shoemaker M, Cadaoas J, Lo A, Liao W, Tagliaferri M, Cohen I, Shtivelman E.
Molecular mechanisms underlying selective cytotoxic activity of
BZL101, an extract of Scutellaria barbata towards breast cancer
cells. Cancer Biol Ther. 2008 Apr;7(4):577-86. (PubMed) |
| |
2. Cheng WY, Hsiang CY, Bau
DT, Chen JC, Shen WS, Li CC, Lo HY, Wu SL, Chiang SY, Ho TY.
Microarray analysis of vanillin-regulated gene expression profile in
human hepatocarcinoma cells. Pharmacol Res. 2007 Dec;56(6):474-82. (PubMed) |
| |
1. Pan WH, Lynn KS, Chen CH,
Wu YL, Lin CY, Chang HY. Using endophenotypes for pathway clusters
to map complex disease genes. Genet Epidemiol. 2006
Feb;30(2):143-54. (PubMed)
|
| Books |
| |
4.
Michael J. Allen, Bela Tiwari, Matthias E. Futschik, and Debbie
Lindel. Methods in aquatic virus ecology: Construction of
microarrays and their application to virus analysis. MANUAL of
AQUATIC VIRAL ECOLOGY, Chapter 5, p.34-56. (2009) |
| |
3.
Yu-l Weng, Tim H.-M. Huang, and Pearlly S. Yan.
Methylated DNA
Immunoprecipitation and Microarray-Based Analysis: Detection of DNA
Methylation in Breast Cancer Cell Lines. Molecular Endocrinology,
Methods in Molecular Biology 590, Chapter 10, p.165-176. (2009) |
| |
2.
Nasser Chegini, PhD and Xiaoping Luo, MD. Gene Expression Profiling
in Leiomyoma in Response to GnRH Therapy and TGF-β.
Contemporary Endocrinology, Genomics in Endocrinology, Chapter 4,
p.67-82. (2008) |
| |
1.
Mark Dodgson, John Mathews, Tim Kastelle and Mei-Chih Hu. The evolving nature of Taiwan's national innovation system: The case of biotechnology innovation networks. Research Policy, Volume 37, Issue 3, April 2008, Pages 430-445.(2008)
|
| Posters |
| |
6.
A.H.K. Tam, C.M. Wong and I.O.L. Ng.
(688) Epigenetic dysregulation of hsa-miR-9 in hepatocellular carcinoma. European Journal of Cancer Supplements. Volume 8, Issue 5, June 2010, Pages 173-174, 21st Meeting of the European Association for Cancer Research.
|
| |
5.
Ing. Jan Verner, Ph.D., RNDr. Jitka Kabáthová,
RNDr. Zbynĕk Zdráhal, Dr., Mgr. Alexandra Tomancová, MUDr. Yvona Brychtová,
MUDr. Jana Volejníková, RNDr.
Šárka Pospíšilová, Ph.D., prof. MUDr.
Jiří Mayer, CSc.
Analýza genového proi lu reakce štĕpu proti hostiteli (GVHD) s
využitím čipové technologie. V. DNY DIAGNOSTICKÉ, PREDIKTIVNÍ A
EXPERIMENTÁLNÍ ONKOLOGIE & II. SYMPOZIUM O CÍLENÉ BIOLOGICKÉ LÉČBĚ
(November 25-27, 2009). |
| |
4.
Cheng MC, Liao DL, Hsu SH, Lai CH, Chen CH.
Identification of genetic risk factors of drug addiction using
genomics approach. World Congress on Psychiatric Genetics (October
11-15, 2008).
|
| |
3.
Lai Y.C., Ma C. and Tyrelle G. D. Whole Genome Microarray
Probe Content Interoperability for Diagnostic Applications.
International Conference Intelligent Systems for Molecular Biology
(July 21-25, 2007). |
| |
2. Tseng J, Chen K, Wang S, Chen I, Kao S,
Lai YC, Tyrelle G, Liao W, Pan CC, Jordan B, and Ma C.
Standardization and Future Usage Expansion of Gene Expression
Microarrays. Advances in Microarray Technology 2006 (October
31-November 02, 2006). |
| |
1.
Tseng J, Chen I, Wang S, Chen K, Ho M, Jokhadze G, Liao W, Ma C, and Pan CC. A Push for Usage Expansion in
DNA Microarrays-Standardization and Cost. The 12th Annual Chips to
Hits (September 12, 2005).
|
