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Below are tutorials to guide you in your use of OneArray Studio:
The Quickstart Tutorials are designed to help you to quickly import and visualize your data in 20-30 minutes. We have also provided a small set of raw data to use for this purpose. These data files are three technical replicates of Sample A and Sample B from the Microarray Quality Control Consortium Project. To learn more about this dataset and the full study performed using Human OneArray, please download and read our MAQC Technote.
In-depth Tutorials explore various functions of OneArray Studio to allow you to cater the program to your individual needs. These tutorials primarily utilize the truncated MAQC dataset and, for continuity, follow the analyses performed in the Quickstart Tutorials. These are in development based on the needs of our customers; please email to suggest additional guides that may be of help.
Finally, we also have a Comprehensive Tutorial developed by the software team that explores all the functions of Array Studio. This tutorial requires a larger timeframe and utilizes the entire MAQC dataset (Samples A, B, C, & D). Expect to set aside three or more hours to complete this tutorial.
A demo version of Array Studio can be downloaded here.
| Function |
Description |
Est.
Time |
Download |
| Download sample data |
Right click on the file and save to your computer to obtain the data used for the Quickstart Tutorials |
1 min |
zip
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| Importing |
Getting your *.gpr data into OneArray Studio for analysis |
10 min |
pdf
 |
| Filtering and Normalizing |
How to filter out background-level signals and normalize your filtered dataset |
10 min |
pdf
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| Differential expression analysis |
How to perform ANOVA hypothesis testing to determine the fold changes in gene expression between two samples |
10 min |
pdf
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| Clustering |
How to generate a Hierarchical clustering interactive diagram based on intensity data |
10 min |
pdf
 |
| Chromosome Viewing |
How to view the changes in gene expression by position on the chromosome |
10 min |
pdf
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| Pathway analysis |
How to perform Gene Ontology (GO)-based analysis to determine affected pathways in your experiment |
10 min |
TBA |
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| Function |
Description |
Est.
Time |
Download |
| Learn Array Studio Functions |
An in-depth exploration of the functions and features of Array Studio using a 20-array MAQC dataset |
3+ hrs |
pdf
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| Function |
Description |
Est.
Time |
Download |
| TBA |
Coming soon! |
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