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All Published Research

Therapeutic effects of Euphorbia Pekinensis and Glycyrrhiza glabra on Hepatocellular Carcinoma Ascites Partially Via Regulating the Frk-Arhgdib-Inpp5d-Avpr2-Aqp4 Signal Axis.

Authors: Zhang Y, Yan C, Li Y, Mao X, Tao W, Tang Y, Lin Y, Guo Q, Duan J, Lin N.
Details: Scientific reports. 2017; 7:41925.
Resource: PubMed
Type: journal
Abstract:

To clarify unknown rationalities of herbaceous compatibility of Euphorbia Pekinensis (DJ) and Glycyrrhiza glabra (GC) acting on hepatocellular carcinoma (HCC) ascites, peritoneum transcriptomics profiling of 15 subjects, including normal control (Con), HCC ascites mouse model (Mod), DJ-alone, DJ/GC-synergy and DJ/GC-antagonism treatment groups were performed on OneArray platform, followed by differentially expressed genes (DEGs) screening. DEGs between Mod and Con groups were considered as HCC ascites-related genes, and those among different drug treatment and Mod groups were identified as DJ/GC-combination-related genes. Then, an interaction network of HCC ascites-related gene-DJ/GC combination-related gene-known therapeutic target gene for ascites was constructed. Based on nodes’ degree, closeness, betweenness and k-coreness, the Frk-Arhgdib-Inpp5d-Avpr2-Aqp4 axis with highly network topological importance was demonstrated to be a candidate target of DJ/GC combination acting on HCC ascites. Importantly, both qPCR and western blot analyses verified this regulatory effects based on HCC ascites mice in vivo and M-1 collecting duct cells in vitro. Collectively, different combination designs of DJ and GC may lead to synergistic or antagonistic effects on HCC ascites partially via regulating the Frk-Arhgdib-Inpp5d-Avpr2-Aqp4 axis, implying that global gene expression profiling combined with network analysis can offer an effective way to understand pharmacological mechanisms of traditional Chinese medicine prescriptions.

 Free PMC Article
Read Full Article: https://www.ncbi.nlm.nih.gov/pubmed/28165501

Regulation of tumorigenesis and metastasis of hepatocellular carcinoma tumor endothelial cells by microRNA-3178 and underlying mechanism.

Authors: Li W, Shen S, Wu S, Chen Z, Hu C, Yan R.
Details: Biochemical and biophysical research communications. 2015; 464(3):881-7.
Resource: PubMed
Type: journal
Abstract:

This study explored the effects of microRNA-3178 (miR-3178) on hepatocellular carcinoma (HCC) tumor endothelial cells (TECs) and on the target mRNA. Real-time polymerase chain reaction (PCR) was performed to detect the differential expression of miR-3178 in hepatic sinusoidal endothelial cells (HSECs) and HCC TECs. Furthermore, HCC TECs were transfected with miR-3178 mimic/inhibitor or their respective negative controls. The expression of miR-3178 before and after transfection was confirmed through RT-PCR. The effects of miR-3178 on the proliferation, apoptosis, cell cycle, invasion, migration, and angiogenesis of HCC TECs were also investigated through methyl thiazol tetrazolium assay, flow cytometry, matrigel invasion assay, transwell migration assay, and tube formation assay. Early growth responsive gene 3 (EGR3), as the putative target of miR-3178, was detected through RT-PCR and Western blot. Compared with HSECs, HCC TECs had lower miR-3178 expression levels (P < 0.001). MiR-3178 mimic inhibited proliferation, arrested cell cycle in G1 phase, and increased apoptosis. The numbers of migrated and invaded cells and capillary-like structures were significantly less in the mimic group than in the other groups. MiR-3178 mimic significantly decreased the mRNA and protein expression levels of EGR3. By contrast, miR-3178 inhibitor induced opposite effects. We conclude that miR-3178 was lowly expressed in HCC TECs, and miR-3178 mimic specifically inhibited the proliferation, migration, invasion, and angiogenesis and promoted the apoptosis and G1 phase arrest of HCC TECs in vitro through the inhibition of EGR3 expression. Thus, miR-3178 might be a critical target in HCC therapy.

Read Full Article: http://www.sciencedirect.com/science/article/pii/S0006291X15302874?via%3Dihub
Research Date: October 1, 2016

Gene expression profiling and pathway analysis data in MCF-7 and MDA-MB-231 human breast cancer cell lines treated with dioscin.

Authors: Aumsuwan P, Khan SI, Khan IA, Walker LA, Dasmahapatra AK.
Details: Data in brief. 2016; 8:272-9.
Resource: PubMed
Type: journal
Read Full Article: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4905937/

A Novel Method to Detect Functional microRNA Regulatory Modules by Bicliques Merging.

Authors: Liang C, Li Y, Luo J.
Details: IEEE/ACM transactions on computational biology and bioinformatics. 2016; 13(3):549-56.
Resource: PubMed
Type: journal
Read Full Article: https://www.computer.org/csdl/trans/tb/2016/03/07174537-abs.html

Transcriptomic analysis of EGb 761-regulated neuroactive receptor pathway in vivo.

Authors: Su SY, Hsieh CL, Wu SL, Cheng WY, Li CC, Lo HY, Ho TY, Hsiang CY.
Details: Journal of ethnopharmacology. 2009; 123(1):68-73.
Resource: PubMed
Type: journal
Read Full Article: http://www.sciencedirect.com/science/article/pii/S0887233316300819?via%3Dihub

Erratum to: Rectocutaneous fistula with transmigration of the suture: a rare delayed complication of vault fixation with the sacrospinous ligament.

Authors: Kadam PD, Chuan HH.
Details: International urogynecology journal. 2016; 27(3):505.
Resource: PubMed
Type: journal
Read Full Article: https://link.springer.com/article/10.1007%2Fs00192-016-2952-5

In silico and experimental analyses predict the therapeutic value of an EZH2 inhibitor GSK343 against hepatocellular carcinoma through the induction of metallothionein genes.

Authors: Liu TP, Hong YH, Tung KY, Yang PM.
Details: Oncoscience. 2016; 3(1):9-20.
Resource: PubMed
Type: journal
Product/Services: Human OneArray Microarray
Abstract:

There are currently no effective molecular targeted therapies for hepatocellular carcinoma (HCC), the third leading cause of cancer-related death worldwide. Enhancer of zeste homolog 2 (EZH2), a histone H3 lysine 27 (H3K27)-specific methyltransferase, has been emerged as novel anticancer target. Our previous study has demonstrated that GSK343, an S-adenosyl-L-methionine (SAM)-competitive inhibitor of EZH2, induces autophagy and enhances drug sensitivity in cancer cells including HCC. In this study, an in silico study was performed and found that EZH2 was overexpressed in cancerous tissues of HCC patients at both gene and protein levels. Microarray analysis and in vitro experiments indicated that the anti-HCC activity of GSK343 was associated with the induction of metallothionein (MT) genes. In addition, the negative association of EZH2 and MT1/MT2A genes in cancer cell lines and tissues was found in public gene expression database. Taken together, our findings suggest that EZH2 inhibitors could be a good therapeutic option for HCC, and induction of MT genes was associated with the anti-HCC activity of EZH2 inhibitors.

Read Full Article: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4751912/
Research Date: January 29, 2016

Correction: fMiRNA-192 and miRNA-204 Directly Suppress lncRNA HOTTIP and Interrupt GLS1-Mediated Glutaminolysis in Hepatocellular Carcinoma.

Authors:
Details: PLoS genetics. 2016; 12(1):e1005825.
Resource: PubMed
Type: journal
Product/Services: Human miRNA OneArray Microarray
Abstract:

Accumulated evidence demonstrated that long non-coding RNAs (lncRNAs) play a pivotal role in tumorigenesis. However, it is still largely unknown how these lncRNAs were regulated by small ncRNAs, such as microRNAs (miRNAs), at the post-transcriptional level. We here use lncRNA HOTTIP as an example to study how miRNAs impact lncRNAs expression and its biological significance in hepatocellular carcinoma (HCC). LncRNA HOTTIP is a vital oncogene in HCC, one of the deadliest cancers worldwide. In the current study, we identified miR-192 and miR-204 as two microRNAs (miRNAs) suppressing HOTTIP expression via the Argonaute 2 (AGO2)-mediated RNA interference (RNAi) pathway in HCC. Interaction between miR-192 or miR-204 and HOTTIP were further confirmed using dual luciferase reporter gene assays. Consistent with this notion, a significant negative correlation between these miRNAs and HOTTIP exists in HCC tissue specimens. Interestingly, the dysregulation of the three ncRNAs was associated with overall survival of HCC patients. In addition, the posttranscriptional silencing of HOTTIP by miR-192, miR-204 or HOTTIP siRNAs could significantly suppress viability of HCC cells. On the contrary, antagonizing endogenous miR-192 or miR-204 led to increased HOTTIP expression and stimulated cell proliferation. In vivo mouse xenograft model also support the tumor suppressor role of both miRNAs. Besides the known targets (multiple 5’ end HOX A genes, i.e. HOXA13), glutaminase (GLS1) was identified as a potential downstream target of the miR-192/-204-HOTTIP axis in HCC. Considering glutaminolysis as a crucial hallmark of cancer cells and significantly inhibited cell viability after silencingGLS1, we speculate that the miR-192/-204-HOTTIP axis may interrupt HCC glutaminolysis through GLS1 inhibition. These results elucidate that the miR-192/-204-HOTTIP axis might be an important molecular pathway during hepatic cell tumorigenesis. Our data in clinical HCC samples highlight miR-192, miR-204 and HOTTIP with prognostic and potentially therapeutic implications.

Read Full Article: http://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1005825
Research Date: January 25, 2016

Optimizing a Male Reproductive Aging Mouse Model by D-Galactose Injection.

Authors: Liao CH, Chen BH, Chiang HS, Chen CW, Chen MF, Ke CC, Wang YY, Lin WN, Wang CC, Lin YH.
Details: International journal of molecular sciences. 2016; 17(1).
Resource: PubMed
Type: journal
Read Full Article: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4730340/

Gene expression profiling identifies candidate biomarkers for active and latent tuberculosis.

Authors: Lee SW, Wu LS, Huang GM, Huang KY, Lee TY, Weng JT.
Details: BMC bioinformatics. 2016; 17 Suppl 1:3.
Resource: PubMed
Type: journal
Read Full Article: https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-015-0848-x
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